Transcript: ENSDART00000144514.2 mars1-201

Description

methionyl-tRNA synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-83]

Gene Synonyms

id:ibd5106, mars

Location

About this transcript

This transcript has 21 exons, is annotated with 40 domains and features, is associated with 1058 variant alleles and maps to 239 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144911.3	mars1-202	3165	951aa	ENSDARP00000123109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000144514.2	mars1-201	3147	942aa	ENSDARP00000122981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVW1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,147 bps, Translation length: 942 residues

Version

ENSDART00000144514.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.