Transcript: ENSDART00000144244.2 cpa6-203

Description

carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]

Gene Synonyms

si:dkey-78n18.1

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 471 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106188.6	cpa6-201	1898	442aa	ENSDARP00000096966.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2H8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182518.1	cpa6-204	5249	408aa	ENSDARP00000150678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QFE3	-
ENSDART00000144244.2	cpa6-203	686	175aa	ENSDARP00000113966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHZ1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134518.2	cpa6-202	748	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 686 bps, Translation length: 175 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144244.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.