Transcript: ENSDART00000136476.2 pbk-202

Description

PDZ binding kinase [Source:ZFIN;Acc:ZDB-GENE-030523-2]

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 240 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000021788.9	pbk-201	1702	339aa	ENSDARP00000013651.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180784.1	pbk-203	1958	339aa	ENSDARP00000153524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHU8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136476.2	pbk-202	745	201aa	ENSDARP00000114079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 745 bps, Translation length: 201 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136476.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.