Transcript: ENSDART00000136234.3 ubap2b-201

Description

ubiquitin associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-070209-122]

Location

About this transcript

This transcript has 27 exons, is annotated with 48 domains and features, is associated with 1421 variant alleles and maps to 243 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136234.3	ubap2b-201	3853	1046aa	ENSDARP00000120289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RUY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191527.1	ubap2b-203	3774	1046aa	ENSDARP00000145520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RUY5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137104.2	ubap2b-202	345	78aa	ENSDARP00000120883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 3,853 bps, Translation length: 1,046 residues

Version

ENSDART00000136234.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.