Transcript: ENSDART00000135475.2 cadm2a-202

Description

cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1614]

Gene Synonyms

igsf4d, zgc:66339

Location

About this transcript

This transcript has 7 exons, is annotated with 27 domains and features, is associated with 912 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056369.7	cadm2a-201	1748	396aa	ENSDARP00000056368.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000135475.2	cadm2a-202	994	331aa	ENSDARP00000113546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAD4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 994 bps, Translation length: 331 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000135475.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.