Transcript: ENSDART00000133981.3 bco2a-201

Description

beta-carotene oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8039]

Gene Synonyms

bco2b, fj48c03, wu:fj48c03

Location

About this transcript

This transcript has 13 exons, is annotated with 6 domains and features, is associated with 855 variant alleles and maps to 132 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133981.3	bco2a-201	6142	572aa	ENSDARP00000113898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QU45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140049.3	bco2a-202	1055	142aa	ENSDARP00000138644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQ01	-
ENSDART00000147963.3	bco2a-203	830	256aa	ENSDARP00000120758.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBA0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 6,142 bps, Translation length: 572 residues

Version

ENSDART00000133981.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.