Transcript: ENSDART00000130062.3 chd4a-201

Description

chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]

Gene Synonyms

im:7143343, si:ch211-51m24.3

Location

About this transcript

This transcript has 41 exons, is annotated with 78 domains and features, is associated with 960 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130062.3	chd4a-201	6394	1929aa	ENSDARP00000111640.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150980.2	chd4a-202	472	38aa	ENSDARP00000126227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITG3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 41, Coding exons: 40, Transcript length: 6,394 bps, Translation length: 1,929 residues

Version

ENSDART00000130062.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.