Transcript: ENSDART00000114040.4 ubr2-202

Description

ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]

Gene Synonyms

si:ch211-239i4.2

Location

About this transcript

This transcript has 47 exons, is annotated with 22 domains and features, is associated with 1904 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114040.4	ubr2-202	6069	1759aa	ENSDARP00000103408.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q745	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000102748.6	ubr2-201	5142	1713aa	ENSDARP00000093524.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZDA3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 47, Coding exons: 47, Transcript length: 6,069 bps, Translation length: 1,759 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000114040.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.