Transcript: ENSDART00000104705.5 si:ch1073-214b20.2-201

Description

si:ch1073-214b20.2 [Source:ZFIN;Acc:ZDB-GENE-131121-231]

Gene Synonyms

zmp:0000000695

Location

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 151 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104705.5	si:ch1073-214b20.2-201	734	244aa	ENSDARP00000095476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000189563.1	si:ch1073-214b20.2-203	2655	221aa	ENSDARP00000157655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QV89	-
ENSDART00000155399.3	si:ch1073-214b20.2-202	933	241aa	ENSDARP00000129526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH17	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 734 bps, Translation length: 244 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000104705.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.