Transcript: ENSDART00000097427.6 msi1-201

Description

musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]

Gene Synonyms

fb40b12, wu:fb40b12, zgc:103751

Location

Chromosome 8: 39,607,466-39,647,216 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 15 domains and features, is associated with 449 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010710.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000097427.6	msi1-201	2176	297aa	ENSDARP00000088198.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144293.2	msi1-204	807	180aa	ENSDARP00000119647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5R9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134822.3	msi1-202	644	214aa	ENSDARP00000121659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S573	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000138380.2	msi1-203	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,176 bps, Translation length: 297 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000097427.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000097427.6 msi1-201

Summary

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Transcript: ENSDART00000097427.6 msi1-201

Summary

About Us

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