Transcript: ENSDART00000087054.6 fam102ba-201

Description

family with sequence similarity 102 member Ba [Source:ZFIN;Acc:ZDB-GENE-060616-312]

Gene Synonyms

fam102b, zgc:136846

Location

About this transcript

This transcript has 11 exons, is associated with 873 variant alleles and maps to 241 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125406.3	fam102ba-202	1326	366aa	ENSDARP00000111010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH54	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087054.6	fam102ba-201	2043	353aa	ENSDARP00000124172.1	Nonsense mediated decay	Q1ECV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,043 bps, Translation length: 353 residues

Version

ENSDART00000087054.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.