Transcript: ENSDART00000080350.5 cxcr4a-201

Description

chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]

Gene Synonyms

cb824

Location

About this transcript

This transcript has 2 exons, is annotated with 38 domains and features, is associated with 163 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080350.5	cxcr4a-201	1636	360aa	ENSDARP00000074800.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149018.2	cxcr4a-202	1227	283aa	ENSDARP00000123851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4X7	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,636 bps, Translation length: 360 residues

Version

ENSDART00000080350.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.