Transcript: ENSDART00000067373.5 edc3-201

Description

enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:NCBI gene;Acc:504054]

Gene Synonyms

im:7151288, lsm16, wu:fb82d07, yjdc, zgc:112006

Location

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 381 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067373.5	edc3-201	4258	506aa	ENSDARP00000067372.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186942.1	edc3-203	6620	506aa	ENSDARP00000155469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL27	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158130.2	edc3-202	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,258 bps, Translation length: 506 residues

Version

ENSDART00000067373.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.