Transcript: ENSDART00000035865.7 sulf2b-201

Description

sulfatase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-775]

Gene Synonyms

si:dkeyp-84g9.1, sulf2a, sulf2l, wu:fb48e04

Location

Chromosome 23: 15,203,822-15,330,168 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 20 domains and features, is associated with 2213 variant alleles and maps to 376 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000013838.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035865.7	sulf2b-201	5114	885aa	ENSDARP00000036209.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QEE9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000139135.2	sulf2b-203	2604	867aa	ENSDARP00000121392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6U9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131649.3	sulf2b-202	962	321aa	ENSDARP00000119381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4H9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143635.2	sulf2b-204	321	60aa	ENSDARP00000122304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHA8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 5,114 bps, Translation length: 885 residues

Version

ENSDART00000035865.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000035865.7 sulf2b-201

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Transcript: ENSDART00000035865.7 sulf2b-201

Summary

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