Transcript: ENSDART00000168615.3 RNF130-201

Description

ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]

Location

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 756 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158052.3	RNF130-202	2597	428aa	ENSDARP00000134816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109293.4	RNF130-203	1182	392aa	ENSDARP00000101069.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q501T3	-
ENSDART00000168615.3	RNF130-201	877	176aa	ENSDARP00000134235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 877 bps, Translation length: 176 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000168615.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.