Transcript: ENSDART00000153551.3 cbx6b-201

Description

chromobox homolog 6b [Source:ZFIN;Acc:ZDB-GENE-110613-1]

Location

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 3 variant alleles and maps to 215 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153551.3	cbx6b-201	1509	502aa	ENSDARP00000127727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180976.1	cbx6b-204	1522	471aa	ENSDARP00000147491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156655.2	cbx6b-203	859	265aa	ENSDARP00000129580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000155028.2	cbx6b-202	752	39aa	ENSDARP00000128181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,509 bps, Translation length: 502 residues

Version

ENSDART00000153551.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.