Transcript: ENSDART00000132162.2 VEZF1-201

Description

vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]

Location

Chromosome 10: 37,083,654-37,126,561 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 32 domains and features, is associated with 697 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008247.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000029843.10	VEZF1-202	1464	488aa	ENSDARP00000032826.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F042	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000132162.2	VEZF1-201	1400	346aa	ENSDARP00000121603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,400 bps, Translation length: 346 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000132162.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132162.2 VEZF1-201

Summary

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Transcript: ENSDART00000132162.2 VEZF1-201

Summary

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