Transcript: ENSDART00000131076.3 rfwd3-201

Description

ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]

Location

Chromosome 25: 37,250,169-37,258,653 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 216 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087752.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155182.3	rfwd3-203	2268	632aa	ENSDARP00000128473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000131076.3	rfwd3-201	1551	516aa	ENSDARP00000112439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153789.2	rfwd3-202	655	184aa	ENSDARP00000127754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,551 bps, Translation length: 516 residues

Version

ENSDART00000131076.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000131076.3 rfwd3-201

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Transcript: ENSDART00000131076.3 rfwd3-201

Summary

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