Transcript: ENSDART00000124223.3 ehmt1b-202

Description

euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]

Location

Chromosome 21: 14,644,248-14,664,445 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 44 domains and features, is associated with 341 variant alleles and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000026634.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123047.3	ehmt1b-201	5362	1278aa	ENSDARP00000111271.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJX1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000124223.3	ehmt1b-202	4502	1005aa	ENSDARP00000110328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QUP3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140737.2	ehmt1b-204	862	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000143959.2	ehmt1b-205	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000134995.2	ehmt1b-203	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,502 bps, Translation length: 1,005 residues

Version

ENSDART00000124223.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000124223.3 ehmt1b-202

Summary

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Transcript: ENSDART00000124223.3 ehmt1b-202

Summary

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