Transcript: ENSDART00000123408.3 si:dkey-190j3.8-202

Description

si:dkey-190j3.8 [Source:ZFIN;Acc:ZDB-GENE-050208-560]

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 28 variant alleles and maps to 342 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000158476.2	si:dkey-190j3.8-204	2286	740aa	ENSDARP00000141691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126434.3	si:dkey-190j3.8-203	2195	650aa	ENSDARP00000104943.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000123293.3	si:dkey-190j3.8-201	2099	691aa	ENSDARP00000106072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000123408.3	si:dkey-190j3.8-202	851	266aa	ENSDARP00000107944.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 851 bps, Translation length: 266 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000123408.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.