Transcript: ENSDART00000173638.2 znf16l-201

Description

zinc finger protein 16 like [Source:ZFIN;Acc:ZDB-GENE-160728-135]

Location

About this transcript

This transcript has 4 exons, is annotated with 44 domains and features, is associated with 221 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173638.2	znf16l-201	2138	528aa	ENSDARP00000142669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NS60-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000173929.2	znf16l-202	4210	522aa	ENSDARP00000142953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,138 bps, Translation length: 528 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0A1D5NS60

Version

ENSDART00000173638.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]