Transcript: ENSDART00000169144.2 si:rp71-1l17.2-202

Description

si:rp71-1l17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-564]

Location

About this transcript

This transcript has 10 exons, is annotated with 46 domains and features, is associated with 136 variant alleles and maps to 1065 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000169144.2	si:rp71-1l17.2-202	3479	1142aa	ENSDARP00000132545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184208.1	si:rp71-1l17.2-204	3244	697aa	ENSDARP00000150493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000192977.1	si:rp71-1l17.2-205	2843	836aa	ENSDARP00000144713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000182248.1	si:rp71-1l17.2-203	2580	836aa	ENSDARP00000153128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000167022.2	si:rp71-1l17.2-201	1664	492aa	ENSDARP00000138070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,479 bps, Translation length: 1,142 residues

Version

ENSDART00000169144.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.