Transcript: ENSDART00000165040.2 SLC27A1-201

Description

solute carrier family 27 member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 384 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159070.2	SLC27A1-202	2471	648aa	ENSDARP00000132062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08BF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165040.2	SLC27A1-201	1635	154aa	ENSDARP00000141001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,635 bps, Translation length: 154 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000165040.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.