Transcript: ENSDART00000163275.2 si:ch211-1i11.3-201

Description

si:ch211-1i11.3 [Source:ZFIN;Acc:ZDB-GENE-030131-8638]

Location

About this transcript

This transcript has 24 exons, is annotated with 16 domains and features, is associated with 1607 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186595.1	si:ch211-1i11.3-204	5015	1356aa	ENSDARP00000146561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000181409.1	si:ch211-1i11.3-203	4922	1325aa	ENSDARP00000150034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000187840.1	si:ch211-1i11.3-205	4919	1324aa	ENSDARP00000148747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QB27	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170438.2	si:ch211-1i11.3-202	3522	1173aa	ENSDARP00000138696.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163275.2	si:ch211-1i11.3-201	3474	1138aa	ENSDARP00000141881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,474 bps, Translation length: 1,138 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000163275.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.