Transcript: ENSDART00000163835.2 si:ch211-171l17.4-202

Description

si:ch211-171l17.4 [Source:ZFIN;Acc:ZDB-GENE-050208-534]

Location

About this transcript

This transcript has 5 exons, is annotated with 27 domains and features, is associated with 105 variant alleles and maps to 243 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000163835.2	si:ch211-171l17.4-202	2503	808aa	ENSDARP00000141036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000183910.1	si:ch211-171l17.4-203	2769	751aa	ENSDARP00000148816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161268.2	si:ch211-171l17.4-201	2764	751aa	ENSDARP00000140237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,503 bps, Translation length: 808 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000163835.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.