Transcript: ENSDART00000165918.2 si:rp71-5o12.3-204

Description

si:rp71-5o12.3 [Source:ZFIN;Acc:ZDB-GENE-070424-283]

Location

Chromosome 4: 31,330,731-31,412,964 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 32 domains and features, is associated with 161 variant alleles and maps to 614 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104064.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000182069.1	si:rp71-5o12.3-205	4081	1182aa	ENSDARP00000156369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000159697.2	si:rp71-5o12.3-203	3538	1125aa	ENSDARP00000135885.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000189539.1	si:rp71-5o12.3-206	3532	1083aa	ENSDARP00000157307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165918.2	si:rp71-5o12.3-204	3172	967aa	ENSDARP00000133346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000128732.3	si:rp71-5o12.3-201	1455	345aa	ENSDARP00000104475.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000157683.2	si:rp71-5o12.3-202	331	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,172 bps, Translation length: 967 residues

Version

ENSDART00000165918.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000165918.2 si:rp71-5o12.3-204

Summary

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Transcript: ENSDART00000165918.2 si:rp71-5o12.3-204

Summary

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