Transcript: ENSDART00000170401.2 TAF12-203

Description

TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]

Location

Chromosome 16: 35,409,289-35,415,004 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 54 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104030.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170048.2	TAF12-202	1473	162aa	ENSDARP00000130095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P013	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170401.2	TAF12-203	902	162aa	ENSDARP00000132266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P013	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157832.2	TAF12-204	769	162aa	ENSDARP00000135237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P013	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164145.2	TAF12-201	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 902 bps, Translation length: 162 residues

Version

ENSDART00000170401.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000170401.2 TAF12-203

Summary

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Transcript: ENSDART00000170401.2 TAF12-203

Summary

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