Transcript: ENSDART00000163256.2 TAF6-201

Description

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040912-23]

Location

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 702 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161751.3	TAF6-204	6990	636aa	ENSDARP00000134854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66HZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184967.1	TAF6-203	6933	617aa	ENSDARP00000148212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163256.2	TAF6-201	2463	584aa	ENSDARP00000132888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000170599.2	TAF6-202	922	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,463 bps, Translation length: 584 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000163256.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.