Transcript: ENSDART00000173982.2 si:ch73-174h16.5-202

Description

si:ch73-174h16.5 [Source:ZFIN;Acc:ZDB-GENE-160728-123]

Location

About this transcript

This transcript has 21 exons, is annotated with 24 domains and features, is associated with 624 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173982.2	si:ch73-174h16.5-202	3795	1084aa	ENSDARP00000142873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QHY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173469.2	si:ch73-174h16.5-201	318	106aa	ENSDARP00000142846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 3,795 bps, Translation length: 1,084 residues

Version

ENSDART00000173982.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]