Transcript: ENSDART00000160925.2 pcdh1g11-201

Description

protocadherin 1 gamma 11 [Source:ZFIN;Acc:ZDB-GENE-050609-7]

Location

About this transcript

This transcript has 7 exons, is associated with 445 variant alleles and maps to 241 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000188827.1	pcdh1g11-202	4409	952aa	ENSDARP00000152911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160925.2	pcdh1g11-201	4365	888aa	ENSDARP00000131275.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,365 bps, Translation length: 888 residues

Version

ENSDART00000160925.2

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.