Transcript: ENSDART00000158865.2 ssna1-202

Description

Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]

Location

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 382 variant alleles and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158865.2	ssna1-202	825	115aa	ENSDARP00000133482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JLK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158069.2	ssna1-201	759	115aa	ENSDARP00000131337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JLK1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 825 bps, Translation length: 115 residues

Version

ENSDART00000158865.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.