Transcript: ENSDART00000172149.2 sh3rf2-203

Description

SH3 domain containing ring finger 2 [Source:ZFIN;Acc:ZDB-GENE-141212-301]

Location

Chromosome 14: 23,874,062-23,970,173 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 37 domains and features, is associated with 444 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101178.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159582.3	sh3rf2-201	2815	769aa	ENSDARP00000140215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QGN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000172149.2	sh3rf2-203	6264	714aa	ENSDARP00000134947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000169151.2	sh3rf2-202	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 6,264 bps, Translation length: 714 residues

Version

ENSDART00000172149.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000172149.2 sh3rf2-203

Summary

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Transcript: ENSDART00000172149.2 sh3rf2-203

Summary

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