Transcript: ENSDART00000179004.2 IRX3-203

Description

iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 146 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162850.3	IRX3-201	1848	454aa	ENSDARP00000139882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179004.2	IRX3-203	4893	450aa	ENSDARP00000143874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000168658.3	IRX3-202	2628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,893 bps, Translation length: 450 residues

Version

ENSDART00000179004.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.