Transcript: ENSDART00000173211.2 TMC8-201

Description

transmembrane channel-like 8 [Source:ZFIN;Acc:ZDB-GENE-081114-2]

Location

Chromosome 11: 45,199,576-45,216,211 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 29 domains and features, is associated with 44 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101050.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168621.2	TMC8-203	3920	684aa	ENSDARP00000141837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2LAK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000173211.2	TMC8-201	3177	663aa	ENSDARP00000142051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173265.2	TMC8-202	482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,177 bps, Translation length: 663 residues

Version

ENSDART00000173211.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000173211.2 TMC8-201

Summary

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Transcript: ENSDART00000173211.2 TMC8-201

Summary

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