Transcript: ENSDART00000159757.2 clca5.2-202

Description

chloride channel accessory 5, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-131126-1]

Location

Chromosome 15: 14,165,476-14,173,128 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features, is associated with 137 variant alleles and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100941.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000159757.2	clca5.2-202	2967	907aa	ENSDARP00000137157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000161891.2	clca5.2-203	3606	731aa	ENSDARP00000138267.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000047531.7	clca5.2-201	3526	563aa	ENSDARP00000047530.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,967 bps, Translation length: 907 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000159757.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000159757.2 clca5.2-202

Summary

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Transcript: ENSDART00000159757.2 clca5.2-202

Summary

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