Transcript: ENSDART00000171804.2 TLK1-201

Description

tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]

Location

About this transcript

This transcript has 21 exons, is annotated with 26 domains and features, is associated with 1342 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171804.2	TLK1-201	3180	756aa	ENSDARP00000136032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000170584.2	TLK1-202	2310	769aa	ENSDARP00000137516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQ51	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,180 bps, Translation length: 756 residues

Version

ENSDART00000171804.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.