Transcript: ENSDART00000158499.2 si:ch211-195b11.3-201

Description

si:ch211-195b11.3 [Source:NCBI gene (formerly Entrezgene);Acc:100334344]

Location

About this transcript

This transcript has 3 exons, is associated with 314 variant alleles and maps to 85 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164440.2	si:ch211-195b11.3-202	990	73aa	ENSDARP00000131020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158499.2	si:ch211-195b11.3-201	838	24aa	ENSDARP00000131450.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 838 bps, Translation length: 24 residues

Version

ENSDART00000158499.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]