Transcript: ENSDART00000161101.2 lyrm5a-202

Description

LYR motif containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-203]

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 371 variant alleles and maps to 203 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161101.2	lyrm5a-202	1801	85aa	ENSDARP00000137307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000067357.7	lyrm5a-201	391	82aa	ENSDARP00000067356.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,801 bps, Translation length: 85 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q503U1

Version

ENSDART00000161101.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.