Transcript: ENSDART00000169527.2 SNX25-201

Description

sorting nexin 25 [Source:ZFIN;Acc:ZDB-GENE-121105-11]

Location

About this transcript

This transcript has 19 exons, is annotated with 36 domains and features, is associated with 1890 variant alleles and maps to 134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000169527.2	SNX25-201	3989	961aa	ENSDARP00000139899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179870.1	SNX25-202	2772	923aa	ENSDARP00000147137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,989 bps, Translation length: 961 residues

Version

ENSDART00000169527.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.