Transcript: ENSDART00000169724.3 cpdp-201

Description

CPD photolyase [Source:ZFIN;Acc:ZDB-GENE-040426-1644]

Location

About this transcript

This transcript has 10 exons, is annotated with 13 domains and features, is associated with 77 variant alleles and maps to 213 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169724.3	cpdp-201	1977	526aa	ENSDARP00000137694.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IS22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000190691.1	cpdp-202	1977	516aa	ENSDARP00000144753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYI9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,977 bps, Translation length: 526 residues

Version

ENSDART00000169724.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.