Transcript: ENSDART00000165911.2 PCIF1-201

Description

phosphorylated CTD interacting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]

Location

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features, is associated with 506 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172081.2	PCIF1-202	2166	721aa	ENSDARP00000135280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165911.2	PCIF1-201	3273	573aa	ENSDARP00000131016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,273 bps, Translation length: 573 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000165911.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.