Transcript: ENSDART00000165356.2 si:ch211-196h24.1-201

Description

si:ch211-196h24.1 [Source:ZFIN;Acc:ZDB-GENE-081103-12]

Location

About this transcript

This transcript has 10 exons, is annotated with 42 domains and features and maps to 349 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000181578.1	si:ch211-196h24.1-202	5167	1191aa	ENSDARP00000157200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192097.1	si:ch211-196h24.1-203	4993	1133aa	ENSDARP00000152339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000165356.2	si:ch211-196h24.1-201	3565	1142aa	ENSDARP00000135655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,565 bps, Translation length: 1,142 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000165356.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.