Transcript: ENSDART00000160284.3 pclob-201

Description

piccolo presynaptic cytomatrix protein b [Source:ZFIN;Acc:ZDB-GENE-030131-8100]

Location

About this transcript

This transcript has 40 exons, is annotated with 335 domains and features, is associated with 1404 variant alleles and maps to 672 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160284.3	pclob-201	30840	9346aa	ENSDARP00000132114.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183486.1	pclob-204	19803	5557aa	ENSDARP00000155153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190171.1	pclob-205	17895	4588aa	ENSDARP00000145288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182024.1	pclob-203	17694	4854aa	ENSDARP00000151687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173169.2	pclob-202	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 40, Coding exons: 39, Transcript length: 30,840 bps, Translation length: 9,346 residues

Version

ENSDART00000160284.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]