Transcript: ENSDART00000172851.2 si:ch211-43f4.1-202

Description

si:ch211-43f4.1 [Source:ZFIN;Acc:ZDB-GENE-160113-156]

Location

About this transcript

This transcript has 20 exons, is annotated with 58 domains and features, is associated with 579 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171255.2	si:ch211-43f4.1-201	6049	749aa	ENSDARP00000130361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KDJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172851.2	si:ch211-43f4.1-202	2626	749aa	ENSDARP00000142363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KDJ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172871.2	si:ch211-43f4.1-203	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,626 bps, Translation length: 749 residues

Version

ENSDART00000172851.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.