Transcript: ENSDART00000155314.2 linc.pou2af1-204

Description

lnc RNA pou2af1 [Source:ZFIN;Acc:ZDB-GENE-030131-8357]

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 374 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155314.2	linc.pou2af1-204	1111	235aa	ENSDARP00000128784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155197.2	linc.pou2af1-203	809	176aa	ENSDARP00000140758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000154383.3	linc.pou2af1-201	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000154958.2	linc.pou2af1-202	823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,111 bps, Translation length: 235 residues

Version

ENSDART00000155314.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.