Transcript: ENSDART00000153637.2 si:zfos-1714f5.4-201

Description

si:zfos-1714f5.4 [Source:ZFIN;Acc:ZDB-GENE-131127-462]

Location

About this transcript

This transcript has 5 exons, is associated with 236 variant alleles and maps to 41 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000153637.2	si:zfos-1714f5.4-201	750	104aa	ENSDARP00000127599.1	Nonsense mediated decay	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 750 bps, Translation length: 104 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153637.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.