Transcript: ENSDART00000002046.8 opn1mw1-201

Description

opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]

Location

About this transcript

This transcript has 5 exons, is annotated with 53 domains and features, is associated with 150 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002046.8	opn1mw1-201	1574	349aa	ENSDARP00000001158.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N9NXZ8 Q9W6A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,574 bps, Translation length: 349 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9W6A5

Version

ENSDART00000002046.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.