Transcript: ENSDART00000174310.2 si:dkey-262g12.7-202

Description

si:dkey-262g12.7 [Source:ZFIN;Acc:ZDB-GENE-110914-181]

Location

About this transcript

This transcript has 4 exons, is annotated with 43 domains and features, is associated with 774 variant alleles and maps to 19 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174310.2	si:dkey-262g12.7-202	1440	294aa	ENSDARP00000143097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000150505.3	si:dkey-262g12.7-201	899	254aa	ENSDARP00000125543.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,440 bps, Translation length: 294 residues

Version

ENSDART00000174310.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]