Transcript: ENSDART00000142422.4 tgm2l-202

Description

transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]

Location

Chromosome 18: 18,832,226-18,849,916 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 734 variant alleles and maps to 152 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093381.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131965.3	tgm2l-201	3347	692aa	ENSDARP00000122920.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQ87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167624.2	tgm2l-203	3347	692aa	ENSDARP00000141521.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQ87	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142422.4	tgm2l-202	2543	692aa	ENSDARP00000119989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQ87	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,543 bps, Translation length: 692 residues

Version

ENSDART00000142422.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142422.4 tgm2l-202

Summary

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Transcript: ENSDART00000142422.4 tgm2l-202

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