Transcript: ENSDART00000162787.2 si:ch73-338o16.4-202

Description

si:ch73-338o16.4 [Source:ZFIN;Acc:ZDB-GENE-131119-14]

Location

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 534 variant alleles and maps to 33 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000146883.3	si:ch73-338o16.4-201	8963	1679aa	ENSDARP00000121840.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162787.2	si:ch73-338o16.4-202	2522	841aa	ENSDARP00000132890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,522 bps, Translation length: 841 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000162787.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.